CDS

Accession Number TCMCG017C31960
gbkey CDS
Protein Id OMO58341.1
Location complement(join(67443..67553,67757..67855,67938..68006,68338..68427,68666..68735,68833..68902,69142..69328,69526..69610,69687..69865,69947..70051,70159..70242,70749..70829,71086..71301,71439..71540,72057..72132,72223..72362,72448..72522,72676..72702))
GeneID InterPro:IPR001278
Organism Corchorus olitorius
locus_tag COLO4_34725

Protein

Length 621aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022432.1
Definition Arginine-tRNA ligase, class Ia [Corchorus olitorius]
Locus_tag COLO4_34725

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03646        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01887        [VIEW IN KEGG]
EC 6.1.1.19        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004814        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006420        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTTACGCAATGCATTAAGGAAGACAGATTTACTGAGATTGTCATCTAGAAGACTTGCTTGGGCAACGAAGACTCAGTCAGTAACCACCATGGCCAATCAAGAGGATGAGAAAATAGGCAGCGTGAAGAATCAGTTAGAAGAACTATTTGGAGCTTCGCTTAGAGTAACTGTTCCTGATGAGCCAGATGTAGAGCCATTGGTAGCTGCCTGCACTAACAAATTTGGTGATTACCAATGTAACAATGCCATGAGCCTGTGGTCTAAAATTAAAGCGAAGAAACCTCCATTCCGTGGGCCTCCAAAGCTTGGAGAGGCTATCAAGGATAATCTCCCGGCCTCTGAAATGATAGAATCGGTCTCAGTTGCTGGCCCTGGATTCGTAAATGTAGTGTTGTCGAAGAATTGGATAGCTAAGAGCATTCAAAAGATGCTAATCGAAGGCATTGACACATGGGCACCAAAGCGGCCAGTTAAAAGGGCTGTTGTGGACTTTTCGTCCCCTAATATAGCAAAAGAAATGCACGTCGGTCACTTGAGGTCTACTATCATTGGTGATACACTTGCCCGCATGCTTGAATTTTCAAATGTTGAAGTTCTTCGGCGAAACCATGTTGGTGACTGGGGGACACAGTTTGGCATGCTGATTGAGTTCCTCTTTGAAAAGTTTCCGAACTTTGAAGATGCTACTGAAACAGCCATTGGAGATCTACAGGCATTTTATAAAGCATCAAAGGAGAGATTCGATTCTGATCCTGCATTCAAGGAGAGAGCTCAACAGGCAGTGGTGCGCCTTCAGGGTGGTGAAGACAAGTATCGTCAGGCATGGGCACAAATATGTGAAATCAGCCGGAATGAATTTCATAAAGTTTATCAGCGGCTTGGAGTTCATCTAGAGGAAAAGGGGGAGAGCTTTTATAATCCATACATTCCTGGGGTTATACAGGCGTTAACTGAAATGGGATTAGTTGTGGAAAGTGAAGGAGCTCGTGTGATAAAAGTTGAAGGCCATAATATACCTCTTATTGTGGTGAAGAGTGATGGTGGGTTCAACTATGCATCAACTGATCTTACTGCTCTTTGGTATCGCCTCAATGAAGAGAAAGCTGAGTGGATTATATACGTTACTGATGTAGGCCAGCAACAGCATTTTGACATGTTCTTCAAGGCTGCCAAGCTTGCAGGGTGGCTTCCAAAAGATGATAGTTCATACCCTAAAACTAGCCATGTTGGTTTTGGCCTTGTTCTTGGAGAAGATGGCAAGCGTTTTAGAACCCGTAGTTCTGAAGTAGTTCGATTAGTTGATCTACTGGATGAAGCCAAAACTAAAAGTAAAGAAGCACTTATTGCGCGTGGTAAGGATAAGGAATGGACTGAGGAGGAGATTGAGAGTACTGCCGAGGCTGTTGGTTATGGTGCTGTAAAGTATGCCGACTTGAAGAACAACAGATTGACCAATTATACATTTAGTTTTGATAAGATGCTGGACGATAAGGGTAACACCGCCATGTATTTGCTGTATGCTCATGCCCGAATCTGTTCAATCATCAGAAAATCTGGCAAAGACATAGAGGAGTTGAAAAAGAAAGGGGTAGTAGAGTTGGGGAACGATGATGAACGTGATTTGGCACTTCATTTGCTGCGGTTTCCCGAGGTTGTTGAAGAGGCTTGTACCAATCTGTTACCAAATGTTTTGTGTGACTATCTTTATAATTTGTCGGAAGTCTACACGAAATTCTATGACAAGTGTAAGGTTGTTGGGTCAGATGAGGAAACGAGCCGACTTCTACTGTGTGAAGCAACTGCTGTAGTTATGCGGAAGTGTTTCCAACTCCTCGGAATCACACCCGTCTACAAGATGTAA
Protein:  
MSLRNALRKTDLLRLSSRRLAWATKTQSVTTMANQEDEKIGSVKNQLEELFGASLRVTVPDEPDVEPLVAACTNKFGDYQCNNAMSLWSKIKAKKPPFRGPPKLGEAIKDNLPASEMIESVSVAGPGFVNVVLSKNWIAKSIQKMLIEGIDTWAPKRPVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGTQFGMLIEFLFEKFPNFEDATETAIGDLQAFYKASKERFDSDPAFKERAQQAVVRLQGGEDKYRQAWAQICEISRNEFHKVYQRLGVHLEEKGESFYNPYIPGVIQALTEMGLVVESEGARVIKVEGHNIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFDMFFKAAKLAGWLPKDDSSYPKTSHVGFGLVLGEDGKRFRTRSSEVVRLVDLLDEAKTKSKEALIARGKDKEWTEEEIESTAEAVGYGAVKYADLKNNRLTNYTFSFDKMLDDKGNTAMYLLYAHARICSIIRKSGKDIEELKKKGVVELGNDDERDLALHLLRFPEVVEEACTNLLPNVLCDYLYNLSEVYTKFYDKCKVVGSDEETSRLLLCEATAVVMRKCFQLLGITPVYKM